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Schedule

8:30AM

Welcome

Doheon Lee (KAIST)

8:45AM-
9:15AM

Keynote

Keynote Address 1
Session Chair: Min Song (New Jersey Institute of Technology)

Xiaohua Tony Hu, Data Mining in Bioinformatics: Challenges and Opportunities

9:15AM-
10:30AM

Session 1

Bio-Data Mining
Session Chair: Leung, Henry Chi-Ming (Univ. of Hong Kong)

Unsupervised Binning of Environmental Genomic Fragments based on an Error Robust Selection of l-mers

Multivariate Classification of Urine Metabolome Profiles for Breast Cancer Diagnosis

DrugNerAR: Linguistic Rule-Based Anaphora Resolver for Drug-Drug Interaction Extraction in Pharmacological Documents

10:30AM-
11:00AM

Coffee Break

11:00AM-
12:00PM

Session 1 (Continued)

Bio-Data Mining: Continued
Session Chair: Leung, Henry Chi-Ming (Univ. of Hong Kong)

Linear predictive coding representation of correlated mutation for protein sequence alignment

Mining Cancer Genes with Running-Sum Statistics

12:00PM-
1:00PM

Lunch

1:00PM-
2:30PM

Session 2

Bio-Text Mining
Session Chair: Shamkant Navathe (Georgia Institute of Technology)

Enabling Relevance Feedback on PubMed by Integrating Learning-to-Rank into DBMS

MKEM: a Multi-level Knowledge Emergence Model for Mining Undiscovered Public Knowledge

Learning Word Sense Disambiguation in Biomedical Text with Difference Between Training and Test Distributions

2:30PM-
3:30PM

Session 3

Bio-Text Mining
Session Chair: Isabel Segura Bedmar (Universidad Carlos III de Madrid)

Efficient Computation of Impact Degrees for Multiple Reactions in Metabolic Networks with Cycles

RetroScope: A Web-based Comparative Visualization System for Human Endogenous RetroVirus(HERV) on Whole Genomes

Incremental Non-Gaussian Analysis of Microarray Gene Expression Data

3:30PM-
4:00PM

Coffee Break

4:00PM-
5:00PM

Session 4

Bio-Text Mining
Session Chair: Wook-Shin Han (Kyungpook National University)

A Graph-based Approach for Biomedical Thesaurus Expansion

Enhancing Public Health Literature Search by Query Expansion with External Knowledge Bases

The Challenge of High Recall in Biomedical Systematic Search

5:00PM-
5:15PM

Session 5

Technology Track

A large-scale gene network inference system for systems biology on supercomputing resources

An Outcome Discovery System to Determine Mortality Factors in Primary Care Facilities


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